PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG058290.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 501aa MW: 55276.2 Da PI: 9.7092

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG058290.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.2	1.9e-10	2	46	53	99
EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 53 rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 r++++r++lt+GW+ Fv+ ++L +gD v+F + +++el+++v+r+ TRIDC1AG058290.5 2 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDDGELRLGVRRA 46 567899***********************..3489999*9996 PP
2	Auxin_resp	114.4	1e-37	71	151	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +aha++tks+F+++YnPr s+seF+v+++k+ k++++++svG+Rfkm++e+ed++err++G+++g+ d+dp W++SkW++L TRIDC1AG058290.5 71 VAHAVATKSMFQIFYNPRLSQSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADP-MWRGSKWKCL 151 79*******************************************************************.9******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
SRGQPRRHLL TTGWSAFVNK KKLVSGDAVL FLRGDDGELR LGVRRAVQLK NGSAFPALYS 60 QCSNLGTLAN VAHAVATKSM FQIFYNPRLS QSEFIVPYWK FTKSFSQPFS VGSRFKMRYE 120 SEDAAERRYT GIITGTGDAD PMWRGSKWKC LLVRWDDDGE FRRPNRVSPW EIELTSSASG 180 SHLAAPTSKR MKPYLPHANP EFTVPHGGGR PDFAESAQLR KVLQGQELLG YRTHDGTAVA 240 TSQPCEARNL QYIDERGCSN NGSNNVLGGV PSHGVKTPLG IPYHCSGFGE SQRFQKVLQG 300 QEVFRPYRGS LVDARMRSGG FHQQDGPYAS ALLDKWRTQQ QHAFGFGSSA PVLPSQPSLS 360 PPSVLMFQQA DPKVSRFEFG QGHLDKNMDD PYARFVSAEA IGRGEQTLSL RPHLGSEVID 420 TRVAVENKGV APTNSCKIFG ISLAEKVRAR DEMGCDDGGA NYPSSTQPLK QQVPKSLGNS 480 CATVHEQRPV VGRAIDVQQW I

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

SRGQPRRHLL TTGWSAFVNK KKLVSGDAVL FLRGDDGELR LGVRRAVQLK NGSAFPALYS  60
QCSNLGTLAN VAHAVATKSM FQIFYNPRLS QSEFIVPYWK FTKSFSQPFS VGSRFKMRYE  120
SEDAAERRYT GIITGTGDAD PMWRGSKWKC LLVRWDDDGE FRRPNRVSPW EIELTSSASG  180
SHLAAPTSKR MKPYLPHANP EFTVPHGGGR PDFAESAQLR KVLQGQELLG YRTHDGTAVA  240
TSQPCEARNL QYIDERGCSN NGSNNVLGGV PSHGVKTPLG IPYHCSGFGE SQRFQKVLQG  300
QEVFRPYRGS LVDARMRSGG FHQQDGPYAS ALLDKWRTQQ QHAFGFGSSA PVLPSQPSLS  360
PPSVLMFQQA DPKVSRFEFG QGHLDKNMDD PYARFVSAEA IGRGEQTLSL RPHLGSEVID  420
TRVAVENKGV APTNSCKIFG ISLAEKVRAR DEMGCDDGGA NYPSSTQPLK QQVPKSLGNS  480
CATVHEQRPV VGRAIDVQQW I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-76	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG058290.5