PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG057750.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 349aa MW: 36559.8 Da PI: 10.8041

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG057750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.6	2.9e-12	42	128	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ e+ aL+ a ++ +l+rg+l++++W+ev+ ++ ++r r+ +qCk++ + l+k+yk+++++ + s + ++ +l+ TRIDC1AG057750.1 42 CWSEGETAALVGAWGSRYVDLNRGNLRQKQWQEVAGAVnsrrgaaARRRPPRTDVQCKNRVDTLKKKYKAERARGGP------SAWNFYGELD 128 7***************************************999999999*****************9998775......4577777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
EMAAAAAAAA SAGGGGGGGG GGGGGGGRLP PPNPNLPYRE DCWSEGETAA LVGAWGSRYV 60 DLNRGNLRQK QWQEVAGAVN SRRGAAARRR PPRTDVQCKN RVDTLKKKYK AERARGGPSA 120 WNFYGELDRL VGPTLAAAAA TKKHPSSGPP GPQFALPLHP SAARRHPSPS SSPSPPPPMA 180 LPLPNYRRGA PLPAAAFIQQ AAAAAAAISD SDDSGDLGDN NSNNSRRSPS RSVSSHSGGN 240 NKRRRRSESS SGGDGGVGEL ARAIEAFAEM YERVESAKQK QSLEMERERI NFMKQLEVKR 300 MENFVDAHVK LARMKHAKKN GGSAANGTIG VELASSVAAL PFLSNPAYL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

EMAAAAAAAA SAGGGGGGGG GGGGGGGRLP PPNPNLPYRE DCWSEGETAA LVGAWGSRYV  60
DLNRGNLRQK QWQEVAGAVN SRRGAAARRR PPRTDVQCKN RVDTLKKKYK AERARGGPSA  120
WNFYGELDRL VGPTLAAAAA TKKHPSSGPP GPQFALPLHP SAARRHPSPS SSPSPPPPMA  180
LPLPNYRRGA PLPAAAFIQQ AAAAAAAISD SDDSGDLGDN NSNNSRRSPS RSVSSHSGGN  240
NKRRRRSESS SGGDGGVGEL ARAIEAFAEM YERVESAKQK QSLEMERERI NFMKQLEVKR  300
MENFVDAHVK LARMKHAKKN GGSAANGTIG VELASSVAAL PFLSNPAYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	5e-29	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG057750.1