PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG054430.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 264aa    MW: 28599.9 Da    PI: 5.7626
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG054430.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.1e-21124174155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GVr+++ +g+W+AeIrdp+    r  r++lg+f+tae+Aa+a+++a+ +++g
  TRIDC1AG054430.2 124 SQYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFDTAEDAARAYDRAAVEFRG 174
                       78********.**********82....48***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
QTFSVSASME ASRQYMIRFD GHFEEGPSSA AAEPPQPFAG RAFSPEQEQS VMVAALLHVV  60
SGYATPAPDL FFPAGKEACT ACGVDGCLGC EFFGAEAGRA VAASDAPRAA TAGGPQRRRR  120
NKKSQYRGVR QRPWGKWAAE IRDPRRAVRV WLGTFDTAED AARAYDRAAV EFRGPRAKLN  180
FSFPEQHLRD DSGNAAAKSD ACSPSPSPRS AEEEETGDLL WDGLVDLMKL DESDLCLLLP  240
VDNTLDKFHA PGQRRSGSGV PLCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-30ERF family protein