PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG049810.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

VOZ

Protein Properties

Length: 566aa MW: 61878 Da PI: 5.1563

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG049810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	410.8	2.6e-126	250	467	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 p+ps++lgpkcalwdc rp++gse++qdyc+ +ha lal + gl+gt+pv+rp+gidlkdg+lf+al akvqgk+vgip+cegaat+kspwna TRIDC1AG049810.1 250 PSPSQYLGPKCALWDCGRPVRGSEECQDYCNPYHAGLALSDdGLLGTRPVMRPRGIDLKDGPLFDALCAKVQGKNVGIPVCEGAATSKSPWNA 342 89***********************************87699********************************************* PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185 elfdlsllege++rewlffd+prrafesgnrkqrslpdy+grgwhesrkqvmk+fgglk+syymdpqpss++ewhl+eyein++++lalyrl TRIDC1AG049810.1 343 HELFDLSLLEGESLREWLFFDRPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKKSYYMDPQPSSNYEWHLFEYEINDSNTLALYRL 435 ***************************************************************************************** PP VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217 e+k +d k+s+k+k+ ++sl+++q+++++l+a TRIDC1AG049810.1 436 EFKASDPKRSVKSKLGSSSLNEIQQQMVKLSA 467 ****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MAGDPTGGGG GSAAGKGPRS STRHQQFRDR AKTRVDDLQE IFSGLQSARK ESRSADAAVL 60 EEQVHQMLRE WRAELSVASP ASSLQNSLGN NQGAADPPSE TLRLLQLAIE EEDDATSKLA 120 QPMQPSRQDG HQNLNPGLQV HGGTVDGGAD ASQQSMGHGM QGELADVANA LFSDQMYYID 180 HELSIDDFLH GSNPDGLNNL QGTGQPEHQQ FNLPLDLQHS NNSYADANNS VQSTGDVFFH 240 MSDLLTTVGP SPSQYLGPKC ALWDCGRPVR GSEECQDYCN PYHAGLALSD DGLLGTRPVM 300 RPRGIDLKDG PLFDALCAKV QGKNVGIPVC EGAATSKSPW NAHELFDLSL LEGESLREWL 360 FFDRPRRAFE SGNRKQRSLP DYNGRGWHES RKQVMKDFGG LKKSYYMDPQ PSSNYEWHLF 420 EYEINDSNTL ALYRLEFKAS DPKRSVKSKL GSSSLNEIQQ QMVKLSANSP VDNKRGARSK 480 TKASQKDTNA NAYPALKATN QAGASNAYEA VPLNIPNQDS TSNAYEDASQ VDPMSYLNEN 540 VVYGPHLPYG YPDGKGDFYW NPSGGA

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MAGDPTGGGG GSAAGKGPRS STRHQQFRDR AKTRVDDLQE IFSGLQSARK ESRSADAAVL  60
EEQVHQMLRE WRAELSVASP ASSLQNSLGN NQGAADPPSE TLRLLQLAIE EEDDATSKLA  120
QPMQPSRQDG HQNLNPGLQV HGGTVDGGAD ASQQSMGHGM QGELADVANA LFSDQMYYID  180
HELSIDDFLH GSNPDGLNNL QGTGQPEHQQ FNLPLDLQHS NNSYADANNS VQSTGDVFFH  240
MSDLLTTVGP SPSQYLGPKC ALWDCGRPVR GSEECQDYCN PYHAGLALSD DGLLGTRPVM  300
RPRGIDLKDG PLFDALCAKV QGKNVGIPVC EGAATSKSPW NAHELFDLSL LEGESLREWL  360
FFDRPRRAFE SGNRKQRSLP DYNGRGWHES RKQVMKDFGG LKKSYYMDPQ PSSNYEWHLF  420
EYEINDSNTL ALYRLEFKAS DPKRSVKSKL GSSSLNEIQQ QMVKLSANSP VDNKRGARSK  480
TKASQKDTNA NAYPALKATN QAGASNAYEA VPLNIPNQDS TSNAYEDASQ VDPMSYLNEN  540
VVYGPHLPYG YPDGKGDFYW NPSGGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-139	VOZ family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG049810.1