PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG049700.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 413aa MW: 45237.4 Da PI: 9.1648

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG049700.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.2	1.9e-10	2	44	55	99
ETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 55 ksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++r++lt+GW++Fv+ ++L +gD v+F + +++el+++v+r+ TRIDC1AG049700.5 2 QPRRHLLTTGWSSFVNKKKLVSGDAVLFL--RGDDGELRLGVRRA 44 5789***********************..3489999**996 PP
2	Auxin_resp	103.1	3.6e-34	69	150	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a++++++s+F+v++ Pr+++seF+v++++++k+l++++s+GmRf+ + e++d++er+ +G+++g+s++dp+rWp+SkWr+L+ TRIDC1AG049700.5 69 VASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHSFSIGMRFRDSNESDDANERS-TGLISGISEVDPIRWPGSKWRCLQ 150 578899*************************************************9.9********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
GQPRRHLLTT GWSSFVNKKK LVSGDAVLFL RGDDGELRLG VRRAVQLRNE ALFKAVNSNE 60 SKLHTLSAVA SSLENRSIFH VCFDPRSGAS EFIVPYWRFS KSLNHSFSIG MRFRDSNESD 120 DANERSTGLI SGISEVDPIR WPGSKWRCLQ VRWDDGNHCN HQRRVSPWEI ERVGGSISVT 180 DCLSASSLKR AKLYFPQGNL DAPVTDGNGY PDSVETGSFH RVLQGQELLM GSRAHGAARS 240 QSPDVAKFRT PDHQRFSANA RSYIPQQSPV EFPYHSSGFG ESLRFPEVLQ GQEMSQALRF 300 YQGTAFDARA QHGGVVGPFG YAQRSAAPGG LSPAAQGYAL GQFTPSAAAA AKVSSPSSVL 360 MFNQATVPQF DLEGRASSYR GAYGGQCPPA MEMARETEEA WPCAQRRTPS VTG

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

GQPRRHLLTT GWSSFVNKKK LVSGDAVLFL RGDDGELRLG VRRAVQLRNE ALFKAVNSNE  60
SKLHTLSAVA SSLENRSIFH VCFDPRSGAS EFIVPYWRFS KSLNHSFSIG MRFRDSNESD  120
DANERSTGLI SGISEVDPIR WPGSKWRCLQ VRWDDGNHCN HQRRVSPWEI ERVGGSISVT  180
DCLSASSLKR AKLYFPQGNL DAPVTDGNGY PDSVETGSFH RVLQGQELLM GSRAHGAARS  240
QSPDVAKFRT PDHQRFSANA RSYIPQQSPV EFPYHSSGFG ESLRFPEVLQ GQEMSQALRF  300
YQGTAFDARA QHGGVVGPFG YAQRSAAPGG LSPAAQGYAL GQFTPSAAAA AKVSSPSSVL  360
MFNQATVPQF DLEGRASSYR GAYGGQCPPA MEMARETEEA WPCAQRRTPS VTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	2e-77	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG049700.5