PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG049700.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 503aa    MW: 55534 Da    PI: 9.0168
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG049700.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3795e-2534135199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW++Fv+ ++L +gD v+F   + 
  TRIDC1AG049700.4  34 FCKTLTASDTSTHGGFSVPRRAAEDCfapldyKQV-RPSQELVAKDLHGTQWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFL--RG 123
                       99****************************97444.34579************************************************..34 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++el+++v+r+
  TRIDC1AG049700.4 124 DDGELRLGVRRA 135
                       89999***9996 PP
2Auxin_resp102.64.9e-34160241183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       +a++++++s+F+v++ Pr+++seF+v++++++k+l++++s+GmRf+ + e++d++er+ +G+++g+s++dp+rWp+SkWr+L+
  TRIDC1AG049700.4 160 VASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHSFSIGMRFRDSNESDDANERS-TGLISGISEVDPIRWPGSKWRCLQ 241
                       578899***************************************************9.9**********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    
QMFRQNVRES ASEEGEDGMA GGDGEKKPRM PHMFCKTLTA SDTSTHGGFS VPRRAAEDCF  60
APLDYKQVRP SQELVAKDLH GTQWRFRHIY RGQPRRHLLT TGWSSFVNKK KLVSGDAVLF  120
LRGDDGELRL GVRRAVQLRN EALFKAVNSN ESKLHTLSAV ASSLENRSIF HVCFDPRSGA  180
SEFIVPYWRF SKSLNHSFSI GMRFRDSNES DDANERSTGL ISGISEVDPI RWPGSKWRCL  240
QVRWDDGNHC NHQRRVSPWE IERVGGSISV TDCLSASSLK RAKLYFPQGN LDAPVTDGNG  300
YPDSVETGSF HRVLQGQELL MGSRAHGAAR SQSPDVAKFR TPDHQRFSAN ARSYIPQQSP  360
VEFPYHSSGF GESLRFPEVL QGQEMSQALR FYQGTAFDAR AQHGGVVGPF GYAQRSAAPG  420
GLSPAAQGYA LGQFTPSAAA AAKVSSPSSV LMFNQATVPQ FDLEGRASSY RGAYGGQCPP  480
AMEMARETEE AWPCAQRRTP SVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-123ARF family protein