PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048720.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 712aa MW: 82193.4 Da PI: 7.065

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048720.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51	4.9e-16	104	185	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF r+ +++k+ +k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIDC1AG048720.5 104 RFYSTHAMLTGFAARRGTNYKR------KKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 185 5******************9......4678*******9988..88888889999******9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
LQENASNGIG TTVQGLLADM LHKQTNSVDP TVQHAEEQDQ LHDVTEGHEL CSNDTSSGSD 60 AGSSSGSELD TELGKCYYPS IEALENSRPP EVGMKFPTLE DAERFYSTHA MLTGFAARRG 120 TNYKRKKFHL LCNRSGKLKP TQDLQRKRKV NVLGSQCQAK VIVKLHNEQW EFTGVKHEHN 180 HPLCPSPSLT SFFLDHKYLS SEEKLFLRVL QQSRVNPRKA MNIFQRMRSN FGNVSSSNEK 240 DMSNSQRVDQ WRKENSDVET ALKRFKELEL RNLGFSYTMQ KDEDNIVRSL FWTDARSKVD 300 YEIFGDFISF STSYSTNRHN MPFTPIIGVN NHGRILVFGC ALLQDQKAET FKWMFQTFLH 360 VMRGKLPKTI IIDQDEGMVK AIAEVMPQVR HRLCKFSVMR KAQEMLGAFM AARGNMNAEL 420 HSLVDNSLTE KEFEEGWAVL IERYDASENE YLRLMWKTRK NWVPVYFQAD FYPFVESAEH 480 GEGSNLLFKD NVLPKDRIEK FIEQYERIQE GIVKTEEEDT LQSATEPAYF SMQPIEKHAA 540 RIYTRQIFLR VQKELYYSTA LNAHEIQGGA AYRLEKVFDY ENPEFDRNSF EVLVDPGTHT 600 FKCQCAKFTR DGILCCHIFR VFTQLGVIEI PAQYIVPRWA REFREERLKE YEEKCSKRTE 660 ERKRCVMLLG KMADIGKGIC ADSAKSGCFM LELDKVQEKL VGADGQIVLW SK

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

LQENASNGIG TTVQGLLADM LHKQTNSVDP TVQHAEEQDQ LHDVTEGHEL CSNDTSSGSD  60
AGSSSGSELD TELGKCYYPS IEALENSRPP EVGMKFPTLE DAERFYSTHA MLTGFAARRG  120
TNYKRKKFHL LCNRSGKLKP TQDLQRKRKV NVLGSQCQAK VIVKLHNEQW EFTGVKHEHN  180
HPLCPSPSLT SFFLDHKYLS SEEKLFLRVL QQSRVNPRKA MNIFQRMRSN FGNVSSSNEK  240
DMSNSQRVDQ WRKENSDVET ALKRFKELEL RNLGFSYTMQ KDEDNIVRSL FWTDARSKVD  300
YEIFGDFISF STSYSTNRHN MPFTPIIGVN NHGRILVFGC ALLQDQKAET FKWMFQTFLH  360
VMRGKLPKTI IIDQDEGMVK AIAEVMPQVR HRLCKFSVMR KAQEMLGAFM AARGNMNAEL  420
HSLVDNSLTE KEFEEGWAVL IERYDASENE YLRLMWKTRK NWVPVYFQAD FYPFVESAEH  480
GEGSNLLFKD NVLPKDRIEK FIEQYERIQE GIVKTEEEDT LQSATEPAYF SMQPIEKHAA  540
RIYTRQIFLR VQKELYYSTA LNAHEIQGGA AYRLEKVFDY ENPEFDRNSF EVLVDPGTHT  600
FKCQCAKFTR DGILCCHIFR VFTQLGVIEI PAQYIVPRWA REFREERLKE YEEKCSKRTE  660
ERKRCVMLLG KMADIGKGIC ADSAKSGCFM LELDKVQEKL VGADGQIVLW SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	2e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048720.5