PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG044920.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 250aa MW: 28514.8 Da PI: 9.5545 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.6 | 5.6e-19 | 91 | 180 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k++++s+v++ +l lp +f+++h ++ ++ +++lede+g +++ + +++ + l++GW++F ++L++gD++vF+l + ++f + TRIDC1AG044920.2 91 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRF--K 175 89*********************9994.44.4459***************..555444..***********************9876777..7 PP EEEE- CS B3 94 vkvfr 98 + +f+ TRIDC1AG044920.2 176 IYIFK 180 77776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
QDKQTPRASP KSRKKFEATT EVRRSSRART TVSYKDDFPE LDDFVRRRRI SKSVDNGRGY 60 TGRISSYQQQ QRAFKRAEKL QDSLDPDNPS FVKTMVRSHV SSCFWLGLPS SFCKDHLPPR 120 EHKMVLEDEE GVEFDAVYIG NRTGLSGGWR GFSMHHDLED GDSLVFELAE PDRFKIYIFK 180 AIEDGKEAEP NDKNTDVDSD SAQEVPDQTD SPVSEPPSSP EPLKGAKRRK LPSSPEPLKG 240 AKRRKLRGRR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 223 | 229 | LKGAKRR |
2 | 227 | 245 | KRRKLPSSPEPLKGAKRRK |
3 | 228 | 246 | KRRKLPSSPEPLKGAKRRK |
4 | 238 | 244 | LKGAKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 7e-44 | B3 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG044920.2 |