PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG044130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 26698.4 Da PI: 8.2691 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.8 | 4.8e-12 | 61 | 102 | 3 | 49 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 y+GVr+++ +grWv+e+r+p + r kr++lg+ g A+ +a+ a TRIDC1AG044130.1 61 YRGVRQRR-WGRWVSEVREP---N-RgKRHWLGTVGA-TLAYDRADVA 102 9****998.*******9998...3.35**********.****999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MRVEGAVGIK GEEMEQASAT TPTTSTIRTK RARPKSSATL KTPVAAPPGG EGGPEDRDHM 60 YRGVRQRRWG RWVSEVREPN RGKRHWLGTV GATLAYDRAD VAIFGSGAIV NFPSAFFIST 120 AQPVQCHPAS SSPYAAAASV FVEHKLRPML AAASVLTEHG VKPMMASASI LDEHEVKPVI 180 TASVFGECEV EPMVTASVFG EHKVKLMVAT SVFDEREVKP MVAASVFGDR EEQPIHTSTI 240 IGSNGALST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 2e-07 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG044130.1 |