PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG040990.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 208aa    MW: 22665.4 Da    PI: 7.8916
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG040990.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.47.6e-14140184347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++++ +++G g+W+ I+r   k+Rt+ q+ s+ qky
  TRIDC1AG040990.2 140 PWTEEEHRMFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKY 184
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAFYRGSGMG MGMGMGMGMG GGSSSSWAPA AMPPPPPPPS RPWTKAEDKV FEGALVAIPE  60
HVPNRWAFVA AQLPGRTPQE AWEHYQALVA DIDLIERGLV EPPESWDDDD DGAAGGGGTV  120
AAGRGRPRGS GGEERRKGIP WTEEEHRMFL EGLEKYGRGD WRNISRWSVK TRTPTQVASH  180
AQKYFIRQAN AATRGDSKRK SIHDITNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-42MYB_related family protein