PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG040990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 160aa    MW: 17947.2 Da    PI: 9.8888
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG040990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.14.7e-1492136347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++++ +++G g+W+ I+r   k+Rt+ q+ s+ qky
  TRIDC1AG040990.1  92 PWTEEEHRMFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKY 136
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MGGGSSSSWA PAAMPPPPPP PSRPWTKAED KVFEGALVAI PEHVPNRWAF VAAQLPGRTP  60
QEAWEHYQAL VADIDLIERG LSGGEERRKG IPWTEEEHRM FLEGLEKYGR GDWRNISRWS  120
VKTRTPTQVA SHAQKYFIRQ ANAATRGDSK RKSIHDITNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.17e-44MYB_related family protein