PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG040510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 344aa    MW: 35464 Da    PI: 10.7257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG040510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-20160209255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g
  TRIDC1AG040510.1 160 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 209
                       7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
SNDRELHASS GGGGITGLGS VVRDGGPGAG WRRRGGGGRL VGAVRGVPGA GDVDDGVGAR  60
EGRVRRRRRL GRRRLGGPPG NGGLRACAGR LLSRRADTGS ARSRDVRRAC VSRAESKAGA  120
GQERRSPDVQ QSAAMGEQYP HTYGGEPAAA AEQASAPERR YRGVRQRPWG KWAAEIRDPH  180
KAARVWLGTF ETAEAAARAY DEAALRFRGS RAKLNFPEDA RLTAPVAPTT ASAAPTVASS  240
AAAYPAGAVS DYLQYQMLLR AGGGGFPPYY GGGGGSSSGS YSLPESSVTV ASVPSSASSA  300
SGYGGAAAEH GEAAQWAWPA ETAWTYPATT GSWSGSSQYP PPPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-25ERF family protein