PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG040090.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 262aa    MW: 28374.3 Da    PI: 8.9166
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG040090.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-1654101148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT+eEd++l+ +++  G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC1AG040090.6  54 KGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 101
                       79******************************99************97 PP
2Myb_DNA-binding57.43.3e-18107151147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++T eEdel+++++ +lG++ W++Ia  ++ gRt++++k++w+++
  TRIDC1AG040090.6 107 RGNFTDEEDELIIRLHSLLGNK-WSLIAGQLP-GRTDNEIKNYWNTH 151
                       89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
NPHATAIYTA PPPLSPPQKQ ERELAAALPC PALESRRSTG MGRSPCCEKE HTNKGAWTKE  60
EDQRLIAYIR ANGEGCWRSL PKAAGLLRCG KSCRLRWMNY LRPDLKRGNF TDEEDELIIR  120
LHSLLGNKWS LIAGQLPGRT DNEIKNYWNT HIKRKLLSRG MDPHTHRPLT AIDGGAASSR  180
PAHIAVPARA APPTMFALPT KQPPVDSSSS DGSSGATSTG EPRCPDLNLD LSVGPPAADT  240
PTSHPVCLCR HLGLRGGAAC SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.15e-90MYB family protein