PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG040090.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 201aa    MW: 22054.9 Da    PI: 8.4261
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG040090.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.11.5e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++l+ +++  G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC1AG040090.5 14 KGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 61
                      79******************************99************97 PP
2Myb_DNA-binding582.1e-1867111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++T eEdel+++++ +lG++ W++Ia  ++ gRt++++k++w+++
  TRIDC1AG040090.5  67 RGNFTDEEDELIIRLHSLLGNK-WSLIAGQLP-GRTDNEIKNYWNTH 111
                       89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MGRSPCCEKE HTNKGAWTKE EDQRLIAYIR ANGEGCWRSL PKAAGLLRCG KSCRLRWMNY  60
LRPDLKRGNF TDEEDELIIR LHSLLGNKWS LIAGQLPGRT DNEIKNYWNT HIKRKLLSRG  120
MDPHTHRPLT AIDGGPPVDS SSSDGSSGAT STGEPRCPDL NLDLSVGPPA ADTPTSHPVC  180
LCRHLGLRGG AACSCRQGDS P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.13e-85MYB family protein