PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033510.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 331aa    MW: 36279.4 Da    PI: 4.7504
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033510.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-2075125155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +g++GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa+a+++a+++++g
  TRIDC1AG033510.8  75 CGFRGVRQRT-WGKWVAEIREP---N-RvSRLWLGTFPTAEDAARAYDEAARAMYG 125
                       79*****999.**********8...2.58************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
THLGVAPIST IYQKKRPRRS RDGPNSVSET IRRWKEVNQQ LEHDPQGAKR ARKPPAKGSK  60
KGCMQGKGGP ENTRCGFRGV RQRTWGKWVA EIREPNRVSR LWLGTFPTAE DAARAYDEAA  120
RAMYGALART NFPAHPAQAP AVALPAAIEG VVRGASASCE STTTSANHSD VASNLPRQAQ  180
ALEIYSQPDV LESTESVVLE SVEHYSHKDT VPDAGSSIAR STSEEDVFEP LEPISSLPDG  240
EADGFDIEEL LRLMEADPIE VEPVTGGSWN CGTNTGVEMG LQEPLYLDGL DSMLEGMLQA  300
DYPYPMWISE DRAMHNPAFH DAEMSEFFEG L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11319QKKRPRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-35ERF family protein