PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033510.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 360aa    MW: 39430 Da    PI: 4.9173
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033510.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.4e-20104154155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +g++GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa+a+++a+++++g
  TRIDC1AG033510.4 104 CGFRGVRQRT-WGKWVAEIREP---N-RvSRLWLGTFPTAEDAARAYDEAARAMYG 154
                       79*****999.**********8...2.58************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
ESTRSHVLVK PIGSSNLPCN EYAFLARQNP KGDALPVASI LRKKRPRRSR DGPNSVSETI  60
RRWKEVNQQL EHDPQGAKRA RKPPAKGSKK GCMQGKGGPE NTRCGFRGVR QRTWGKWVAE  120
IREPNRVSRL WLGTFPTAED AARAYDEAAR AMYGALARTN FPAHPAQAPA VALPAAIEGV  180
VRGASASCES TTTSANHSDV ASNLPRQAQA LEIYSQPDVL ESTESVVLES VEHYSHKDTV  240
PDAGSSIARS TSEEDVFEPL EPISSLPDGE ADGFDIEELL RLMEADPIEV EPVTGGSWNC  300
GTNTGVEMGL QEPLYLDGLD SMLEGMLQAD YPYPMWISED RAMHNPAFHD AEMSEFFEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-36ERF family protein