PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG033240.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26463.8 Da PI: 5.3949 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 62 | 112 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g TRIDC1AG033240.2 62 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 112 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
VIDVVVYDQL HVHVVLVHRH GLLVVSLLAG ERRQCREGGA AQAAAGRGRG RKSKRSSDGK 60 HPVYRGVRMR AWGKWVSEIR EPRKKSRIWL GTFPTAEMAA RAHDVAALAI KGARSAHLNF 120 PELADVLPRA ASPAPKDVQA AAALAAAFTS SPPPLSTDQS ESEEGLIQEE TVKNDAGAGA 180 TAPPESAATA TSCGGAAEQA EEEELRQLFD LPDLLIDIED GFGFSTMWAP LPDVEEVNAD 240 LRLEEPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-39 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG033240.2 |