PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 381aa    MW: 40855.7 Da    PI: 8.375
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-13159203347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC1AG033160.1 159 PWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKY 203
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
SSLPSFPSPA PTTATNHHST VNPLPSRLLC SHHHHTSLLL PAHLSSPPSG ARGRLVPTPA  60
GALAAPGMTR RCSHCSHNGH NSRTCPNRGV KIFGVRLTDG SIRKSASMGN LSLLGGSTSG  120
GGGASPADVG HDAAAEGYAS DDFVQGSSSA NRERKKGVPW TEEEHRRFLL GLQKLGKGDW  180
RGISRNFVVS RTPTQVASHA QKYFIRQANM SRRKRRSSLF DLVPDESDLP PLPGNQEPEA  240
QILNHPPLPP PMEEEEVESM ESDTSVIAES SSASAIMPEN LQSSYPVLVP AYFSPFLQFS  300
VPFWQNQNDG DDLGQGTHEI VKPVPVHSKS PINVDELVGM SKLSIGDPKQ DTVSTSLSLK  360
MVGGQNRQSA FQANLPTRAQ A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-75MYB_related family protein