PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033040.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 275aa    MW: 30711.8 Da    PI: 10.3816
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033040.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-15155199347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++++ kqlG+g+W+ I++ + ++Rt+ q+ s+ qky
  TRIDC1AG033040.2 155 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKY 199
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
VRTKPPTHQE SVSPSFPSCG SLQIIQRPIH FQQDTATILR LIRPLFHQRQ RPRNPRLHRP  60
SGEGMEEEGA RKAVLFRLFG VEVRGAEEED DAEPMELKKS TSMPNLACAS NSPPLLLPGE  120
ASHDKGYASD DGELASTPQL KRCRRKAQER KKGIPWTEEE HRKFLEGLKQ LGKGDWRGIS  180
KNFVTTRTAT QVASHAQKYF LRQTNPGKKK RRASLFDVGI PAAHSYDDQL PSPQSVGTKL  240
APAEKILHTD RGDVPLPSYP GGIRGSNNNM QMQVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142152RCRRKAQERKK
2208212KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-36MYB_related family protein