PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 268aa    MW: 29220.2 Da    PI: 9.5612
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.6e-1591135347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++++ kqlG+g+W+ I++ + ++Rt+ q+ s+ qky
  TRIDC1AG033040.1  91 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKY 135
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEEEGARKAV LFRLFGVEVR GAEEEDDAEP MELKKSTSMP NLACASNSPP LLLPGEASHD  60
KGYASDDGEL ASTPQLKRCR RKAQERKKGI PWTEEEHRKF LEGLKQLGKG DWRGISKNFV  120
TTRTATQVAS HAQKYFLRQT NPGKKKRRAS LFDVGIPAAH SYDDQLPSPQ SVGTKLAPAE  180
KILHTDRGDV PLPSYPGGIR GSNNNMQMQA DELTDRVKKR SKFPTGTSLA AMAASGLELA  240
MSSSASSILE LSIAPPRCYG AVDAIKVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17888RCRRKAQERKK
2144148KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-36MYB_related family protein