PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG032640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 215aa MW: 23548.8 Da PI: 10.6034 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 29.4 | 2.1e-09 | 6 | 45 | 45 | 86 |
trihelix 45 rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +s +qC++k+e+l+kry+++++++ +r+++ ++p+f l+ TRIDC1AG032640.1 6 KSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 45 799**********************98443..47****9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
PTATYKSGVQ CRHKIEKLRK RYRAERTRSM GRSKGPKWPF FPLLHDLAGG GVPDASPNPI 60 IKIKPRGNAT PASPSPVSSP SSEDAGRSRS LHGLISNGGG GSGLRFTIPK ASRTKPGVPR 120 EARPDRDRGD DDPEAEAMAE VASALRAVGE GFLRMEERRL ELSLQMEKER MESEMKRTQA 180 LLDAQQVFVE AFLGKQQPHH KKAKLVSSAA AMEED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24860.1 | 3e-09 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG032640.1 |