PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG030270.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 249aa    MW: 27834.9 Da    PI: 8.7973
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG030270.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.24.5e-282878151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien++ rqvtfskRrng+lKKA+ELSvLCd+eva+ +f ++g+lye+ss
  TRIDC1AG030270.5 28 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDVEVALAVFCPRGRLYEFSS 78
                      79***********************************************96 PP
2K-box59.11.9e-2097190497
             K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                       + ++++ + + ++ + +   L k++e L+ ++ ++lGe+L+ +s +eL+ Le ++eksl+ iR kK+++l +qi +l++ke+ l ++n++Lr 
  TRIDC1AG030270.5  97 NVNNKTVQPDIQQVKADTVSLAKKLEALEVSKLKILGENLGGCSAEELNCLEVNIEKSLRIIRGKKTQVLEQQIANLKEKERTLLKDNEDLRG 189
                       4555577888999******************************************************************************98 PP

             K-box  97 k 97 
                       k
  TRIDC1AG030270.5 190 K 190
                       7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
IGLFSGGEGI DRAPPQAGRM VRGKTEMKRI ENETSRQVTF SKRRNGLLKK AFELSVLCDV  60
EVALAVFCPR GRLYEFSSAT SLQKSIDRYK AYRKDNNVNN KTVQPDIQQV KADTVSLAKK  120
LEALEVSKLK ILGENLGGCS AEELNCLEVN IEKSLRIIRG KKTQVLEQQI ANLKEKERTL  180
LKDNEDLRGK QRDLEASLVV PALNCVTPLQ PRGQLAPEQE PVPSDEDVET ELYIGLPGVR  240
CSNRRSENL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.19e-64MIKC_MADS family protein