PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG030270.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 25982.9 Da    PI: 9.2457
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG030270.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.43.9e-28959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien++ rqvtfskRrng+lKKA+ELSvLCd+eva+ +f ++g+lye+ss
  TRIDC1AG030270.4  9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDVEVALAVFCPRGRLYEFSS 59
                      79***********************************************96 PP
2K-box59.31.6e-2078171497
             K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                       + ++++ + + ++ + +   L k++e L+ ++ ++lGe+L+ +s +eL+ Le ++eksl+ iR kK+++l +qi +l++ke+ l ++n++Lr 
  TRIDC1AG030270.4  78 NVNNKTVQPDIQQVKADTVSLAKKLEALEVSKLKILGENLGGCSAEELNCLEVNIEKSLRIIRGKKTQVLEQQIANLKEKERTLLKDNEDLRG 170
                       4555577888999******************************************************************************98 PP

             K-box  97 k 97 
                       k
  TRIDC1AG030270.4 171 K 171
                       7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVRGKTEMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD VEVALAVFCP RGRLYEFSSA  60
TSLQKSIDRY KAYRKDNNVN NKTVQPDIQQ VKADTVSLAK KLEALEVSKL KILGENLGGC  120
SAEELNCLEV NIEKSLRIIR GKKTQVLEQQ IANLKEKERT LLKDNEDLRG KQRDLEASLV  180
VPALNCVTPL QPRGQLAPEQ EPVPSDEDVE TELYIGLPGV RCSNRRSGQA K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.15e-64MIKC_MADS family protein