PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG030270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 230aa MW: 25854.7 Da PI: 9.2457

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG030270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.4	3.9e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCd+eva+ +f ++g+lye+ss TRIDC1AG030270.1 9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDVEVALAVFCPRGRLYEFSS 59 79***********************************************96 PP
2	K-box	59.6	1.3e-20	78	171	4	97
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + ++++ + + ++ + + L k++e L+ ++ ++lGe+L+ +s +eL+ Le ++eksl+ iR kK+++l +qi +l++ke+ l ++n++Lr TRIDC1AG030270.1 78 NVNNKTVQPDIQQVKADTVSLAKKLEALEVSKLKILGENLGGCSAEELNCLEVNIEKSLRIIRGKKTQVLEQQIANLKEKERTLLKDNEDLRG 170 4555577888999******************************************************************************97 PP K-box 97 k 97 k TRIDC1AG030270.1 171 K 171 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MVRGKTEMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD VEVALAVFCP RGRLYEFSSA 60 TSLQKSIDRY KAYRKDNNVN NKTVQPDIQQ VKADTVSLAK KLEALEVSKL KILGENLGGC 120 SAEELNCLEV NIEKSLRIIR GKKTQVLEQQ IANLKEKERT LLKDNEDLRG KRDLEASLVV 180 PALNCVTPLQ PRGQLAPEQE PVPSDEDVET ELYIGLPGVR CSNRRSGQAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	1e-64	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG030270.1