PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG019980.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 208aa    MW: 24138.5 Da    PI: 9.0114
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG019980.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.98.9e-151392190
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                      ++Yn Y+ e+GF +r  ks+++  +g   ++++ C++ gk+++ +++         ++rt+C  ++++ +++d+ w++ + +  HnHe+ 
  TRIDC1AG019980.2 13 DYYNLYSWECGFGIRYGKSRTN-VKGAKSMQELLCNCGGKPKKVNST---------SSRTECPTMIRLLRTEDDGWYICEYKVSHNHEML 92
                      69****************9998.7777999**********9987665.........9******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MGLTFDSLGE AYDYYNLYSW ECGFGIRYGK SRTNVKGAKS MQELLCNCGG KPKKVNSTSS  60
RTECPTMIRL LRTEDDGWYI CEYKVSHNHE MLHTCAKKLH FPSHRHIDKY TRELVSQLRQ  120
NNVNLSNVYS IIGTFFGRIE NVPFTKRCMR TLCAKLSRDQ ADGDVKKTMD YFAELKQSDP  180
EFTYTVRVDN ESTVRTLIWT TGKSKLQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-16FAR1 family protein