PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG018700.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 856aa    MW: 94928.5 Da    PI: 6.0694
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG018700.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.43.9e-195096148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT eEd++l +av+ + g++Wk+Ia++++  Rt+ qc +rwqk+l
  TRIDC1AG018700.4 50 KGNWTLEEDDILRKAVEIHNGKNWKKIAECFP-DRTDVQCLHRWQKVL 96
                      79******************************.************986 PP
2Myb_DNA-binding56.75.6e-18102148148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+W++eEd+++++ vk++G+  W+tIa+ +  gR +kqc++rw+++l
  TRIDC1AG018700.4 102 KGPWSKEEDDIIIQMVKKYGPTKWSTIAQALS-GRIGKQCRERWHNHL 148
                       79******************************.*************97 PP
3Myb_DNA-binding53.65e-17154196145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       +++WT+eE+ +l++a++ +G++ W+  ++ ++ gRt++ +k++w+
  TRIDC1AG018700.4 154 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNAIKNHWH 196
                       679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 856 aa     Download sequence    
MTSDKGRTSK KAAEGSPSAL AVPDGRASSG PQKGQLSNGR TTGPARRSTK GNWTLEEDDI  60
LRKAVEIHNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL VKGPWSKEED DIIIQMVKKY  120
GPTKWSTIAQ ALSGRIGKQC RERWHNHLNP GINKDAWTQE EEIRLIQAHH IYGNKWAELS  180
KFLPGRTDNA IKNHWHSSVK KKYESYRAEG LLAQFQGLPA ALYPTGSLNV DSSSAMMQQN  240
SDGSGLNVNQ EVQDSSEFSQ SALANISSSQ VEQVDEPVGC HGQIHSSDGA HDSYSSCQEA  300
CDTKANDAAS TLPETRHQLS ISENDPDMHW QQDLSVADFD LQSELWQDIS YQSLTAPDSI  360
SADSFFSPNY QHSACSSEVA NNFEEPLYPL HTYSSSRTGT VHHQSSATSV PPSFICSGRA  420
SQIVSSELPI VPESKEQQMT SVEESLPIVP ESKEQQLTSV EESQPLESTT MGREASPNHG  480
KSVVGQKQHS ESLCYEPPCF PSLEVPFVSC ELISSSDLPE YSPLGIRQFM RPSMSFSTPL  540
RLWSSPTRDR SPDDVLKSAA KSSVCTPSIM KKRQREPPSP IPDVRLAKKM GTEKDCGSSA  600
MPSTRTERSC RDATRDDSLD LIPENSKDII YQGKTEDNAN INTLEKRERC STTERDTAYN  660
LVSAGILTDR NGPNPERRKL NTPTKSFSKD IISSRSKPTE LLVEKSSVYI NADYEYVNIL  720
ADTPGIKRGL ESPSAWKSPL FTNFQDGFFM SPTGTTFDAL GLVKQINEQN APALEEAHEL  780
LESGSLCNKE SSDKENIKHI VIKKEHATTN QISNVMSEAR ILDFNECTTP VKKKEDNRCS  840
TLGRSPTSSY VLKNVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.21e-104MYB family protein