PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG016350.12 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 138aa MW: 15834 Da PI: 7.4641 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.7 | 1.9e-13 | 36 | 115 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y e+GF +r ks+ + +++ +++ vC ++gk++ e+++ + r++C a +++ +d+ w++t+ + HnH+++ TRIDC1AG016350.12 36 DFYNLYLWEIGFGIRYGKSRLN-AERTKSMQEIVCGCSGKPDAENSR---------SCRCKCPALIRLLCASDNSWYITEHRASHNHSMS 115 6*****************9999.44558999*********9997666.........99*****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MSALELSIRK YDEQPDKSVV RPELGLSFDS LGEAYDFYNL YLWEIGFGIR YGKSRLNAER 60 TKSMQEIVCG CSGKPDAENS RSCRCKCPAL IRLLCASDNS WYITEHRASH NHSMSLTMGE 120 KVHWPSHKHI DVYTKDLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 5e-11 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG016350.12 |