PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG014550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 210aa MW: 21756.8 Da PI: 9.3053 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126.5 | 1.2e-39 | 29 | 129 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrr+Ca++C+++p f +p+kfa vhk+FGasnv+k+l +++e++r da++slvyeA+ r+rdPvyG++g il+lqqq++ l+ae TRIDC1AG014550.1 29 PCAACKLLRRRCAQECPFSPFFSPLEPHKFASVHKVFGASNVSKMLLEVHESQRGDAANSLVYEANLRLRDPVYGCMGAILTLQQQVHALEAE 121 7******************************************************************************************** PP DUF260 94 lallkeel 101 la++++++ TRIDC1AG014550.1 122 LAAVRAQI 129 ***99885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MMAAARRSSS LPAAGAGPGS TPSFNTMTPC AACKLLRRRC AQECPFSPFF SPLEPHKFAS 60 VHKVFGASNV SKMLLEVHES QRGDAANSLV YEANLRLRDP VYGCMGAILT LQQQVHALEA 120 ELAAVRAQIL KHRYRPAAAA AASAVPNVPP SSHASQLLAA GGHRPAGSLG LAAPAVGPVA 180 SASSSTTVYA AASSSTDYSS ITHENVPFFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30340.1 | 4e-64 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG014550.1 |