PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG011830.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 348aa    MW: 37743.8 Da    PI: 4.8811
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG011830.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-075292046
                      TTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46
                      G+g W+ Ia+ m+ gRt++++k+ w++
  TRIDC1AG011830.3  5 GTG-WSQIAAQMP-GRTDNEIKNLWNS 29
                      889.*********.*********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MLCSGTGWSQ IAAQMPGRTD NEIKNLWNSS LKKKLRQKGI DPNTHKPLTE ADRIGAAPTI  60
STERTSGSSD VNPSSAGALG NFGHLLSETA QSSVLLPVYD KKRPETPSLA RPKVPAKELF  120
LDQLTAGHES PSSCRSSGPT LYFPFQQQLG YSNECGSGDG ANMNSLWFNQ NDFSCNTIST  180
VMPTVSPSAL STPMGLNLPP DNHRHGGTGI GSAPFYWDGV NPSSSGSTGS SGSNSMGFEP  240
QSTNSILENS VFPWTDIGVG QEKDTRVQLV EELKWPDLLH GTFAEATTAM QNQSQSLYDD  300
VIKAESQFNM EGICASWFQN QQPQQQLQAA SDMYDKDLQR MPLSFEHI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13137LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.14e-14MYB family protein