PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG011830.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 429aa    MW: 47276.8 Da    PI: 6.6414
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG011830.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.8e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l + ++++G g+W+++++  g+ R++k+c++rw +yl
  TRIDC1AG011830.2 14 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                      678*******************************************97 PP
2Myb_DNA-binding43.95.5e-1467110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++ ++E++l+v++++ lG++ W+ Ia+ m+ gRt++++k+ w++
  TRIDC1AG011830.2  67 RGAFAQDEEDLIVELHAVLGNR-WSQIAAQMP-GRTDNEIKNLWNS 110
                       79999*****************.*********.*********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF AQDEEDLIVE LHAVLGNRWS QIAAQMPGRT DNEIKNLWNS SLKKKLRQKG  120
IDPNTHKPLT EADRIGAAPT ISTERTSGSS DVNPSSAGAL GNFGHLLSET AQSSVLLPVY  180
DKKRPETPSL ARPKVPAKEL FLDQLTAGHE SPSSCRSSGP TLYFPFQQQL GYSNECGSGD  240
GANMNSLWFN QNDFSCNTIS TVMPTVSPSA LSTPMGLNLP PDNHRHGGTG IGSAPFYWDG  300
VNPSSSGSTG SSGSNSMGFE PQSTNSILEN SVFPWTDIGV GQEKDTRVQL VEELKWPDLL  360
HGTFAEATTA MQNQSQSLYD DVIKAESQFN MEGICASWFQ NQQPQQQLQA ASDMYDKDLQ  420
RMPLSFEHI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.11e-79MYB family protein