PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009560.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 337aa MW: 37581.7 Da PI: 6.4556

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009560.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64	3.4e-20	64	133	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegek 69 +W++ e+ a +++r ++++++ ++k++k+lWe+vs+++ +++gf r+p qCk+kw+nl +r+k ++ ++ TRIDC1AG009560.3 64 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAVSARLnAQGGFARTPDQCKSKWKNLVTRFKGTASDAQ 133 7***********************************88999******************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
FAPLSRPPPP PPPPAMDPFH HLNTAFSNPY HPLLSSSPPH PYHPPPPLPP PPATDPPERE 60 RLPQWSHAET AAFLAIRADL DHSFLSTKRN KALWEAVSAR LNAQGGFART PDQCKSKWKN 120 LVTRFKGTAS DAQAEAAGGG DHHAGAAARG NFPFHDEMRR IFDARVERAR ALEAKKAKGK 180 DAAARRDPDD DGGGEGDEDE DDEEEAEMFD KEEGRADAET RGAGKKRRRK AAPARTASAG 240 GGVEIGEVEA VLREFMRRQM EMEERWMEAA EARDAERRAR EEEWRAAMVA LGEERLALVR 300 RWREREDAWR ARAEEREERR HQLVAALLAK LGGDTSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	230	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	4e-24	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009560.3