PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG009560.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 340aa MW: 37963.2 Da PI: 6.5261

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG009560.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64	3.4e-20	67	136	1	69
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegek 69 +W++ e+ a +++r ++++++ ++k++k+lWe+vs+++ +++gf r+p qCk+kw+nl +r+k ++ ++ TRIDC1AG009560.2 67 QWSHAETAAFLAIRADLDHSFLSTKRNKALWEAVSARLnAQGGFARTPDQCKSKWKNLVTRFKGTASDAQ 136 7***********************************88999******************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
FPHFAPLSRP PPPPPPPAMD PFHHLNTAFS NPYHPLLSSS PPHPYHPPPP LPPPPATDPP 60 ERERLPQWSH AETAAFLAIR ADLDHSFLST KRNKALWEAV SARLNAQGGF ARTPDQCKSK 120 WKNLVTRFKG TASDAQAEAA GGGDHHAGAA ARGNFPFHDE MRRIFDARVE RARALEAKKA 180 KGKDAAARRD PDDDGGGEGD EDEDDEEEAE MFDKEEGRAD AETRGAGKKR RRKAAPARTA 240 SAGGGVEIGE VEAVLREFMR RQMEMEERWM EAAEARDAER RAREEEWRAA MVALGEERLA 300 LVRRWRERED AWRARAEERE ERRHQLVAAL LAKLGGDTSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	233	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	4e-24	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG009560.2