PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG008490.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 234aa MW: 24055.2 Da PI: 8.5005

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG008490.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.7	7.1e-42	60	159	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrr+C++ Cvlapyfp ++p+kfa +h++FGasn++kll++lpee+r da+ss+vyeA arardPvyG++g i +lq+q++ lka+ TRIDC1AG008490.2 60 PCAACKILRRRCVDRCVLAPYFPPTDPHKFATAHRVFGASNIIKLLQDLPEEQRADAVSSMVYEAAARARDPVYGSAGAICQLQRQVDGLKAQ 152 7****************************************************************************************** PP DUF260 94 lallkee 100 la++++e TRIDC1AG008490.2 153 LARAQAE 159 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
HRTNGDRIPQ PASSAQLQVN RARANRSNME SSGDTAPLHS SPTPTSPPAM ATGAAVVMSP 60 CAACKILRRR CVDRCVLAPY FPPTDPHKFA TAHRVFGASN IIKLLQDLPE EQRADAVSSM 120 VYEAAARARD PVYGSAGAIC QLQRQVDGLK AQLARAQAEL AAARAHHAHL VALLCVEVAT 180 AAATPPQDAY CTGGGGSQTQ LAAPPGVGSA HADALYVVNG GAAGGGGIMQ AGHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28500.1	1e-52	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG008490.2