PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG007920.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 141aa    MW: 16263.3 Da    PI: 9.7404
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG007920.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.8e-18251155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC1AG007920.6  2 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 51
                      78*******************......55************************997 PP
2AP229.22.3e-0994133144
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 
                       s+y+GV+ +k  grW+A+   +     +k+++lg f+ + eAa+
  TRIDC1AG007920.6  94 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAAR 133
                       89********.7******5553..2.26**********889997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVDADINFNL  60
SDYEDDMKQM KGLSKEEFVH VLRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI  120
YLGLFDNEVE AARFLSLDSA H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.35e-79AP2 family protein