PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG007920.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 313aa MW: 34480.4 Da PI: 8.056

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG007920.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22	4.1e-07	2	33	19	55
AP2 19 Irdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +rd + k+++lg f+ta Aa+a+++a+ k++g TRIDC1AG007920.3 2 CRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 33 677......55************************997 PP
2	AP2	41.2	4e-13	76	126	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g TRIDC1AG007920.3 76 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 126 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
ECRDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF NLSDYEDDMK QMKGLSKEEF 60 VHVLRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDNE VEAARAYDKA 120 AIKCNGREAV TNFEPSTYDA ELLNEVAAEG ADVDLNLSIS QPTSQSPKRD KSSLGLQLHH 180 GSYDGSELKR PKVDAPPEMV AIPHRYPLLT EHPPIWHGQS YPLFLNNEEA ARDHSRRPEV 240 ATGAVPTWAW RVSHPPPTQP MPLFSSSSSA AASSGFSKTA AAAAPGAPSA SFRFDPMAPS 300 SSSSNQHHHH HPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	2e-85	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG007920.3