PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG007920.12 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 274aa MW: 30763.7 Da PI: 9.9763 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.6e-17 | 58 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC1AG007920.12 58 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 107 78*******************......55************************997 PP | |||||||
2 | AP2 | 41.5 | 3.3e-13 | 150 | 200 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+a+++a+ k +g TRIDC1AG007920.12 150 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 200 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MPVPQHWAEL GFFRPAAPPP DMRILQLQQQ AHAPPPPPPA AQPPVAKKSR RGPRSRSSQY 60 RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA DINFNLSDYE 120 DDMKQMKGLS KEEFVHVLRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF LGKKYIYLGL 180 FDNEVEAARA YDKAAIKCNG REAVTNFEPS TYDAELLNEV AAEGADVDLN LSISQPTSQS 240 PKRDKSSLGL QLHHGSYDGS ELKRPKASTN AFFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 5e-99 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG007920.12 |