PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG007920.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 145aa MW: 16759.8 Da PI: 10.0374 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.2 | 8.3e-18 | 6 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC1AG007920.10 6 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 55 78*******************......55************************997 PP | |||||||
2 | AP2 | 29.1 | 2.5e-09 | 98 | 137 | 1 | 44 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 s+y+GV+ +k grW+A+ + +k+++lg f+ + eAa+ TRIDC1AG007920.10 98 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAAR 137 89********.7******5553..2.26**********889997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI 60 NFNLSDYEDD MKQMKGLSKE EFVHVLRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG 120 KKYIYLGLFD NEVEAARFLS LDSAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-78 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG007920.10 |