PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG004880.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 216aa    MW: 24179.1 Da    PI: 8.3214
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG004880.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.8e-121663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W + Ed +lv  v++lG ++W+  a+  g++Rt+k+c++rw +yl
  TRIDC1AG004880.3 16 KGPWAENEDAQLVWFVRLLGERRWDFLAQVSGLRRTGKSCRLRWVNYL 63
                      79********************************************97 PP
2Myb_DNA-binding52.51.1e-1669114148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr T++E+ l++ +++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC1AG004880.3  69 RGRITADEERLILSLHAEWGSR-WSRIARKLP-GRTDNEIKNYWRTHM 114
                       899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MCNNSGGRGG ARAARKGPWA ENEDAQLVWF VRLLGERRWD FLAQVSGLRR TGKSCRLRWV  60
NYLHPGLKRG RITADEERLI LSLHAEWGSR WSRIARKLPG RTDNEIKNYW RTHMRKKAQE  120
EKMLAKKKAV AEASSSTTSL TTTTCSASAT ATSSRAATTE APQESGTSMD DEAEEEATTS  180
VSEENKAEVV QYCSAVDIDQ LWNDIAASES YPEMMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.32e-61MYB family protein