PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93630.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 502aa MW: 56438 Da PI: 7.8711

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	439	461	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+++F++ L H r+H TEY93630.1 439 HVCPFCNRVFKNGQALGGHKRSH 461 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MDENQELRFV CKLCFKKYPC GKSLGGHMRS CVVANAAESD DKLIDPNFKK FPSFIVVGGG 60 MESPMSDSRI GDLGNGQSSY GLRENPRKSW RAVDSTSPLP QEKFCKQCGK GFQSMKALCG 120 HMACHSDKDR GMKDDHSWTS ESQKLVMDSH SDTEGEDRAI RTRSSKSKRF RKIVVNSPFP 180 NGSLSVSEID GEEQEEVAMC LMMLSRDTGS KGESSDNNSV ILETKSSSID IKNMRKKCDL 240 VKNEKKIGDV VKGENSDSDY FLDECAKGEE SDVSMDGLRR SIGVDEYEEF RQSLNRSRSY 300 RAEVKKVLAK ENEYDHGNAN SIAARIEQSR KRRYAIENSE MYNDYDDNRI KRGELPSAEK 360 RQKYECFNCK KAFKSYQALG GHRPCHKKIN ALYEPRYETG ENSVDDEYVA RGKTVESTSS 420 RKPGSSCDKK TKAKKSKGHV CPFCNRVFKN GQALGGHKRS HFIGGHEVNT HPSPVAKLDL 480 LDLNLPAPQD DEDDGDDQYS PW

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MDENQELRFV CKLCFKKYPC GKSLGGHMRS CVVANAAESD DKLIDPNFKK FPSFIVVGGG  60
MESPMSDSRI GDLGNGQSSY GLRENPRKSW RAVDSTSPLP QEKFCKQCGK GFQSMKALCG  120
HMACHSDKDR GMKDDHSWTS ESQKLVMDSH SDTEGEDRAI RTRSSKSKRF RKIVVNSPFP  180
NGSLSVSEID GEEQEEVAMC LMMLSRDTGS KGESSDNNSV ILETKSSSID IKNMRKKCDL  240
VKNEKKIGDV VKGENSDSDY FLDECAKGEE SDVSMDGLRR SIGVDEYEEF RQSLNRSRSY  300
RAEVKKVLAK ENEYDHGNAN SIAARIEQSR KRRYAIENSE MYNDYDDNRI KRGELPSAEK  360
RQKYECFNCK KAFKSYQALG GHRPCHKKIN ALYEPRYETG ENSVDDEYVA RGKTVESTSS  420
RKPGSSCDKK TKAKKSKGHV CPFCNRVFKN GQALGGHKRS HFIGGHEVNT HPSPVAKLDL  480
LDLNLPAPQD DEDDGDDQYS PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	4e-64	C2H2 family protein