PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93535.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 265aa MW: 29535.1 Da PI: 6.2968

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	46	68	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H TEY93535.1 46 YSCSFCRRDFRSAQALGGHMNVH 68 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MEEARYWMWA KTKPELAAYG DSWEEQAFAE DAAGALGGCV WPPRSYSCSF CRRDFRSAQA 60 LGGHMNVHRR DRARLKQSPN PTVAEIAPQN PTQICTFLFN NPNPNPNQFP DSVPFVSPIP 120 HVIRVCSPPI EEKNNTLTLR FLSSNVGKGE KDDKPPSWSS FLSEKRVDSI RNSEKNPAAA 180 DPDSRAERED CVTEDLSMGL NLGGRRRQSN DEEVASCKRR RIEEKPLSSL SVVERCLPQP 240 EVLKAGGGGD ELDLELRLGD APKVK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	221	RRRQSNDEEVASCKRRR
2	218	222	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17810.1	9e-28	C2H2 family protein