PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93496.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 267aa MW: 32142.5 Da PI: 8.07

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	72.8	5.8e-23	24	106	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r e++ ++ ++k++k lWe +s +m+e+g++rs++qCk+kw+nl +ryk ++++e + +++++++++l+ TEY93496.1 24 QWSIQETRDFLVIRAELDPNFMETKRNKMLWEMISTRMKEKGYSRSAEQCKCKWKNLVTRYKGCETMETEA---MRQQFQFYNELQ 106 7********************************************************************85...456799999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MDHHHQQLHQ LYSESVGGSD RFPQWSIQET RDFLVIRAEL DPNFMETKRN KMLWEMISTR 60 MKEKGYSRSA EQCKCKWKNL VTRYKGCETM ETEAMRQQFQ FYNELQMIFA TRMQRMLWLE 120 AEGSGTASKK KKAAQLSSDE EEEGEEEESD GQKGHKKKMK KSKSNPNSSN SVVAGVREMM 180 DEFMKQQMQM EVQWMKAYEA REEERRIKEM EWRQTMEALE NERMMMEKRW REREEQRKVR 240 EEARAEKRDA LVTALLNKLR REDSSNM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	160	KKKKAAQLSSDEEEEGEEEESDGQKGHKKKMK
2	129	163	KKKKAAQLSSDEEEEGEEEESDGQKGHKKKMKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	1e-50	Trihelix family protein