PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY92987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C3H | ||||||||
Protein Properties | Length: 164aa MW: 18013.7 Da PI: 10.4168 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 27.9 | 4.2e-09 | 63 | 88 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+ C f G C +Gd+C+FaHg+ TEY92987.1 63 KTKMCIKFKTEGGCMFGDKCSFAHGE 88 899*********************96 PP | |||||||
2 | zf-CCCH | 29.7 | 1.1e-09 | 139 | 162 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k +lC++f r G C +G+rC+FaH+ TEY92987.1 139 KKKLCKNFTR-GSCMFGERCHFAHV 162 889*******.*************6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MDSRKRGRPE SSYGGASKKS KTDSVSLFLP TTPHYTSRIS AFSRISQFIF FVIGYKAVPG 60 AIKTKMCIKF KTEGGCMFGD KCSFAHGERE LIAPSDRGGV DLCLAETTRG ILISNTSSLK 120 VHSTESRKPA RGKIDSNSKK KLCKNFTRGS CMFGERCHFA HVAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19360.1 | 9e-08 | C3H family protein |