PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90952.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 334aa MW: 36910.7 Da PI: 9.4449

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.6e-05	123	146	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F ++ +L++H+++ H TEY90952.1 123 HPCTVCGELFQTPASLHNHQSStH 146 78******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MPTLIHKATI MPTIIPSSFS NLFLLFFHLA CFCFSFSSHH HHSPSSLLHK KRSPPNPNPK 60 PTLFSYLKRL FTPSSATHIP PPPPSIPSPS SSTRSLRLNP PLLAPINTRP HHHTHAVATA 120 DIHPCTVCGE LFQTPASLHN HQSSTHGVSH LPDGDNIIRI IFTTAWPRKP PSIHRILKIH 180 NTPRVLARFE DHRDRVKSAA AANGTKSSRC VADGNELLRF YCTTFLCSLD SAICSHQFCG 240 ACGIIRYGFS KKLSGIHTLP TAWKAHAAVP EDVEEEFSFM HVKRAMLVCR VIAGRVGNVD 300 KDRAFDSLVG PGEDDLLVFS PKAVLPCFVI VYTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	2e-73	C2H2 family protein