PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90195.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 320aa MW: 36850.9 Da PI: 9.305

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9e-06	167	186	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r n++ H+ TEY90195.1 167 FSCNICSKTFNRYNNMQMHM 186 89*****************9 PP
2	zf-C2H2	12.4	0.00048	251	274	1	23
EEET.TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp.dCgksFsrksnLkrHirtH 23 + C CgksF k + ++H +++ TEY90195.1 251 FACRkSCGKSFAVKGDWRTHEKNC 274 77999***************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MLKNIKLCLD TRNSIEWLKS FPPPSSSTQN HSKNAMSFFQ FPLFYQQQQQ TAHKHDQERE 60 NYMYETIQCL PLLSRLTEKE VKEEEDEGLD REKRGRLNEN VTVALHIGLP EVGGIEGDKR 120 KRYGFSEDDE EYSVKKKMNK SSNGSLNCER RFWIPTPAQI LVGPMQFSCN ICSKTFNRYN 180 NMQMHMWGHG SEFRKGPESL RGTQPAAMLR LPCYCCAAGC KNNVNHPRAK PLKDFRTLQT 240 HYKRKHGAKP FACRKSCGKS FAVKGDWRTH EKNCGKLWYC TCGSDFKHKR SLKDHIRSFG 300 KGHAPHPSLD GFACSDDDTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	140	KRKRYGFSEDDEEYSVKKKMNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-113	C2H2 family protein