PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89342.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 302aa MW: 35181 Da PI: 10.123

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.9e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++I+++++ ++R +k+c +rw +yl TEY89342.1 4 RQRWQPEEDALLRAYVKQYGPREWNLISQRLPsaLHRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	33.9	7.3e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T++E+ l + + +++G++ Wk+Ia++++ gRt+k + +w + TEY89342.1 59 KGSLTPDEQSLVISLQAKYGNK-WKKIAAEIP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MKERQRWQPE EDALLRAYVK QYGPREWNLI SQRLPSALHR DPKSCLERWK NYLKPGIKKG 60 SLTPDEQSLV ISLQAKYGNK WKKIAAEIPG RTAKRLGKWW EVFKEKQLKH HHHHHSSPSH 120 SGNYDHILDT FAEKYVQPNP PAVLPPWMNA SPPTSSPSVS LTLSPSESSA FPVAEMGVLI 180 RELEEGREVW ARQRKEAAWR VRRLEQQLEA EKARRGREKA EEVEAQIRRL REEEAAYVSR 240 MEGEYRERLG AVQREEEAEE AKLMEAWRRV HVRLEKLLPQ IGSHRPSLLS SPNNGLQPFT 300 HI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	6e-61	MYB family protein