PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY88772.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 135aa MW: 15543.2 Da PI: 7.6977 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.5 | 5.1e-05 | 24 | 46 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C++ F++ L H++ H TEY88772.1 24 YDCSYCKRGFTNAQALGGHMNIH 46 88*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MDPEKSHNSD TSTAESDKHN GRSYDCSYCK RGFTNAQALG GHMNIHRKDK EKAKAKAKAK 60 EKNHEPDPLV RSFGSGFLQG YDHVNPGLQT RNNEQCFFPV WRPDKFPHGN PSLMRVEDHE 120 HQEEVDLELR LGRLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 3e-13 | C2H2 family protein |