PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87716.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 546aa    MW: 60185 Da    PI: 4.7823
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS458.63.7e-1401805441374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++++la+al++++  la +++ +m+++a+yf+eALa+r+++    ly    p +++  +s+ + + +  f+e++P+lkf+h+taN
  TEY87716.1 180 LVHTLMACAEAVQQENFKLAEALVKNIGFLAVSQAGAMRKVATYFAEALARRIYK----LY----PANQQ--DSAFNDMLQMHFYETCPYLKFAHFTAN 268
                 689***************************************************9....44....33333..35566566667**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g++rvH+iDf+++qG+QWpaLlqaLa Rp+gpps+R+Tg+g+p++++++ l+e+g+rLa++Ae+++v+fe++ +va++l+dl+  ++++++
  TEY87716.1 269 QAILEAFAGKSRVHVIDFSMKQGMQWPALLQALALRPGGPPSFRLTGIGPPSHDETDHLQEVGWRLAQLAESINVEFEYRGFVANSLADLDAAMFEIRE 367
                 *************************************************************************************************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres....eerikvErellgre 293
                 gE++aVn++++lh+ll++++++e+    vL++v +l+P++++vveqea+hn++ Fl+rf+e+l+yys+lfdsle+  +  +     +++++++++lgr+
  TEY87716.1 368 GETVAVNSIFELHQLLARPGAIEK----VLQVVSELKPEILTVVEQEANHNGSAFLDRFTESLHYYSTLFDSLESCGGGGEeavsVQDKVMSEVYLGRQ 462
                 ************************....*********************************************8764333324558999********** PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i+nvvaceg +r+erhetle+W++r+++aGF++v+l+++a+kqa++ll+ ++ +dgyrv+e++g+l+lgW++rpL+++SaW+
  TEY87716.1 463 ICNVVACEGVDRVERHETLEQWKSRFGSAGFEAVHLGSNAYKQASMLLALFAgGDGYRVDENNGCLMLGWHTRPLIATSAWK 544
                 *********************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MKPDHFNRQN FSSANPKMWP CQPDDGGVDE HFAVLGYNVK SSDMAGVAQK LEQLEEAMGS  60
FHQEGLSQLA DETVHYNPSD IASWLESMIS GFNPIPEFDS SSDPFLESSA SVNSQMPIDL  120
DFGSDLIAIP GKAVYPRTQP PPPEQNQPQP KKLKTSIAAV APPPPATPLL VDSQENGIRL  180
VHTLMACAEA VQQENFKLAE ALVKNIGFLA VSQAGAMRKV ATYFAEALAR RIYKLYPANQ  240
QDSAFNDMLQ MHFYETCPYL KFAHFTANQA ILEAFAGKSR VHVIDFSMKQ GMQWPALLQA  300
LALRPGGPPS FRLTGIGPPS HDETDHLQEV GWRLAQLAES INVEFEYRGF VANSLADLDA  360
AMFEIREGET VAVNSIFELH QLLARPGAIE KVLQVVSELK PEILTVVEQE ANHNGSAFLD  420
RFTESLHYYS TLFDSLESCG GGGEEAVSVQ DKVMSEVYLG RQICNVVACE GVDRVERHET  480
LEQWKSRFGS AGFEAVHLGS NAYKQASMLL ALFAGGDGYR VDENNGCLML GWHTRPLIAT  540
SAWKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein