PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY87288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | NF-YC | ||||||||
Protein Properties | Length: 136aa MW: 15225.5 Da PI: 10.2311 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 40.8 | 4.9e-13 | 22 | 100 | 20 | 97 |
NF-YC 20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 e+P r+k+i+k d+d++++ aea l++ + +lf+ l+ +s a e+kr+t+ i a++r + dfl+d p TEY87288.1 22 EIPTRRVKNIMKLDKDISKVNAEALFLVASSTQLFLQFLAEKSAHAAVEKKRKTITLELIRIATKRHRpTADFLLDSLP 100 7899*********************************************************9999875389*****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MAEQEEGENA AGIDEPPPPK LEIPTRRVKN IMKLDKDISK VNAEALFLVA SSTQLFLQFL 60 AEKSAHAAVE KKRKTITLEL IRIATKRHRP TADFLLDSLP LPAEQNHPGD RAKSRPDKKP 120 VPFATRSIDA FFQKTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 1e-40 | NF-YC family protein |