PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY86900.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 494aa MW: 55399.5 Da PI: 7.1975

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY86900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00062	426	448	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp C+++F++ L H r+H TEY86900.1 426 HACPFCDRVFKNGQALGGHKRSH 448 67******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MADESRYVCK LCNKRFPCGK SFGGHMRSHV VANSAEIEEN LECFDMKRDQ FVSDSGYILR 60 ENPKKSWRAV RPPLQEEKVC KQCGKGFKSM KALCGHMACH SERERGGASA KDDQYSWTSE 120 NQKVVLDSHS DTETEERMVR IRTRSASKSR KCKKIAEDWP FVLGNNGSSS VSEIDGHEQE 180 EMAVCLMMLS RDCGVKVGVN SVVESSENNS VVVETKSSSM EVRKERVERY EEGKFGDGET 240 AKMEDSDSGY FLDECAKGES EVSVDCNRRS GGFGVWKKSS QINSCANELR KSRKGNAYDD 300 DEDEIVVDDD EKCGGVESRK RKYGSGFWNE SARMVKSGDK KSKYECFNCK KTFKSYQALG 360 GHRPCSKRTN AYGECGENSP DDSAYYKSST AKFVESPSKR KESSAKSPSE KKIKTKKNNS 420 NNNKPHACPF CDRVFKNGQA LGGHKRSHFL TGHDESSSRS LVEKPDDDIR DLLDLNLPAP 480 EADEDEDGGH FLPW

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MADESRYVCK LCNKRFPCGK SFGGHMRSHV VANSAEIEEN LECFDMKRDQ FVSDSGYILR  60
ENPKKSWRAV RPPLQEEKVC KQCGKGFKSM KALCGHMACH SERERGGASA KDDQYSWTSE  120
NQKVVLDSHS DTETEERMVR IRTRSASKSR KCKKIAEDWP FVLGNNGSSS VSEIDGHEQE  180
EMAVCLMMLS RDCGVKVGVN SVVESSENNS VVVETKSSSM EVRKERVERY EEGKFGDGET  240
AKMEDSDSGY FLDECAKGES EVSVDCNRRS GGFGVWKKSS QINSCANELR KSRKGNAYDD  300
DEDEIVVDDD EKCGGVESRK RKYGSGFWNE SARMVKSGDK KSKYECFNCK KTFKSYQALG  360
GHRPCSKRTN AYGECGENSP DDSAYYKSST AKFVESPSKR KESSAKSPSE KKIKTKKNNS  420
NNNKPHACPF CDRVFKNGQA LGGHKRSHFL TGHDESSSRS LVEKPDDDIR DLLDLNLPAP  480
EADEDEDGGH FLPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	354	RKRKYGSGFWNESARMVKSGDKKSKYECFNCKKTFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	2e-36	C2H2 family protein