PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY81443.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 687aa MW: 76574.3 Da PI: 9.2943

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY81443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.4e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C++ F ++ n++rHir+H TEY81443.1 77 RCKKCSREFCSPINYRRHIRVH 98 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MPATKLCSSG TLNAMKSEVG NDSLDTFIRQ AVGKEPLLPF PRTVDSSVPW IQLFQALDQP 60 DLPSWPLLTP VKVQMQRCKK CSREFCSPIN YRRHIRVHRR SLNINKEWHK NRDLLAVFWD 120 KLSLERAKEI VSFNDIILKD IPGSSVVKAL ASSLRRPGVW SLPQAYVKAG ATLLDIIQAK 180 PSRLPISSQE LFSILDDASE STFLCAGTAE SLQKYVFDGE TAKNSLELKN LVALTSFLFE 240 QQLVKAWVAD KDAEALRCQK LLVEEEEAEQ KRQVVILERK KQKKLRQKQQ KVREQYYGCS 300 RDLNVYVDAI DRPTSAEASD LSSPSDPNSN SKEVPTTSDS VQPQNKESDE DIGAQFDARS 360 EHKKHGDSPA VELQMVVANG VRQVATNCLQ ALKSQRGSRY GAHANLNLRT LNPELMHKFG 420 PSKDRSLHNG NKVWTKKLKT NNGGENPRPP SLQDVSSHHI EQNDGEVIIG SISVKLTCYF 480 DQQQASHPNE RQDTCGTEQA VLKKKTASEK PAKSNSLQSG TNRVATRLWR PVSCGESKNV 540 PPVGRSNGDP EDNATLSKVH DHTSSSDRSG QSESLDSDGC HNGKQSHVVS VENAQPGLVP 600 FSIEAAKEFF ARRWKDAISG DHVKLVLSSE HKPHGCSDIQ HASDPPRSKA PNQDENQFGR 660 TVQVQVAIKP EKSVKFKYIP KQKLSRR

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MPATKLCSSG TLNAMKSEVG NDSLDTFIRQ AVGKEPLLPF PRTVDSSVPW IQLFQALDQP  60
DLPSWPLLTP VKVQMQRCKK CSREFCSPIN YRRHIRVHRR SLNINKEWHK NRDLLAVFWD  120
KLSLERAKEI VSFNDIILKD IPGSSVVKAL ASSLRRPGVW SLPQAYVKAG ATLLDIIQAK  180
PSRLPISSQE LFSILDDASE STFLCAGTAE SLQKYVFDGE TAKNSLELKN LVALTSFLFE  240
QQLVKAWVAD KDAEALRCQK LLVEEEEAEQ KRQVVILERK KQKKLRQKQQ KVREQYYGCS  300
RDLNVYVDAI DRPTSAEASD LSSPSDPNSN SKEVPTTSDS VQPQNKESDE DIGAQFDARS  360
EHKKHGDSPA VELQMVVANG VRQVATNCLQ ALKSQRGSRY GAHANLNLRT LNPELMHKFG  420
PSKDRSLHNG NKVWTKKLKT NNGGENPRPP SLQDVSSHHI EQNDGEVIIG SISVKLTCYF  480
DQQQASHPNE RQDTCGTEQA VLKKKTASEK PAKSNSLQSG TNRVATRLWR PVSCGESKNV  540
PPVGRSNGDP EDNATLSKVH DHTSSSDRSG QSESLDSDGC HNGKQSHVVS VENAQPGLVP  600
FSIEAAKEFF ARRWKDAISG DHVKLVLSSE HKPHGCSDIQ HASDPPRSKA PNQDENQFGR  660
TVQVQVAIKP EKSVKFKYIP KQKLSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	278	285	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-119	C2H2 family protein